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テンプレート:Infobox protein family (ソースを閲覧)

2018年8月16日 (木) 05:50時点における版

203 バイト除去 、 2018年8月16日 (木)
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{| class="infobox" style="width: 22em; text-align: left; font-size: 88%; line-height: 1.5em"
{{infobox
! colspan=2 style="font-size: 125%; text-align: center" | {{{Name|{{PAGENAME}} }}}
| above = {{{Name|{{PAGENAME}} }}}
|-
| bodystyle = {{#switch:{{{align|}}}
{{#if:{{{image|}}}|
| left = float:left; clear:left; margin: 0.5em 1em 0.5em 0;
{{!}} colspan=2 style="text-align:center" {{!}} [[Image:{{{image}}}{{!}}{{#if:{{{width|}}}|{{{width}}}|220}}px]]
| center = float:none; margin:auto
{{!}}-
| none = float:none; margin: 0.5em 0 0.5em 0;
{{#if:{{{caption|}}}|
| right | #default =
{{!}} colspan=2 style="text-align:center" {{!}} {{{caption}}}
}}
{{!}}-
 
}}
| image = {{#invoke:InfoboxImage|InfoboxImage|image={{{image|}}}|size={{{image_size|{{{width|}}}}}}|sizedefault=frameless|alt={{{alt|}}}}}
|<includeonly>[[Category: Protein pages needing a picture]]</includeonly>}}
| caption = {{{caption|}}}
! colspan=2 scope="col" style="text-align:center; background-color: #ddd" | Identifiers
 
|-
| headerstyle = background-color: #ddd
! style="background-color: #e7dcc3" | Symbol
| labelstyle  = background-color: #e7dcc3
| style="background-color: #eee" | {{{Symbol|?}}}
| datastyle  = background-color: #eee
|-
 
{{#if:{{{Pfam|}}}|
| header1 = Identifiers
! style="background-color: #e7dcc3" {{!}} [[Pfam]]
 
{{!}} style="background-color: #eee" {{!}} [http://pfam.sanger.ac.uk/family?acc={{{Pfam}}} {{{Pfam}}}]
| label2 = Symbol
{{!}}-
| data2  = {{#if:{{{Symbol|}}} |{{{Symbol}}} | ?{{main other|[[Category:Protein articles without symbol]]}} }}
}}
 
{{#if:{{{Pfam_clan|}}}|
| label3 = [[Pfam]]
! style="background-color: #e7dcc3" {{!}} [[Pfam]] clan
| data3  = {{#if:{{{Pfam|}}}| [http://pfam.xfam.org/family?acc={{{Pfam}}} {{{Pfam}}}]}}
{{!}} style="background-color: #eee" {{!}} [http://pfam.sanger.ac.uk/clan/{{{Pfam_clan}}} {{{Pfam_clan}}}]
| label4 = [[Pfam]] clan
{{!}}-
| data4  = {{#if:{{{Pfam_clan|}}}| [http://pfam.xfam.org/clan/{{{Pfam_clan}}} {{{Pfam_clan}}}]}}
}}
| label5 = [[InterPro]]
{{#if:{{{InterPro|}}}|
| data5  = {{#if:{{{InterPro|}}}| [https://www.ebi.ac.uk/interpro/entry/{{{InterPro}}} {{{InterPro}}}]}}
! style="background-color: #e7dcc3" {{!}} [[InterPro]]  
| label6 = [[Simple Modular Architecture Research Tool|SMART]]
{{!}} style="background-color: #eee" {{!}} [http://www.ebi.ac.uk/interpro/entry/{{{InterPro}}} {{{InterPro}}}]
| data6  = {{#if:{{{SMART|}}}|[http://smart.embl-heidelberg.de/smart/do_annotation.pl?DOMAIN={{{SMART}}} {{{SMART}}}]}}
{{!}}-
| label7 = [[PROSITE]]
}}
| data7  = {{#if:{{{PROSITE|}}}{{{Prosite|}}}| [http://www.expasy.org/cgi-bin/prosite-search-ac?{{#if:{{{PROSITE|}}}|{{{PROSITE}}}|{{{Prosite|}}}}} {{#if:{{{PROSITE|}}}|{{{PROSITE}}}|{{{Prosite|}}}}}]}}
{{#if:{{{SMART|}}}|
| label8 =  [[CATH database|CATH]]
! style="background-color: #e7dcc3" {{!}} [[Simple Modular Architecture Research Tool|SMART]]
| data8  = {{#if:{{{CATH|}}}| [http://www.cathdb.info/pdb/{{{CATH}}} {{{CATH}}}]}}
{{!}} style="background-color: #eee" {{!}} [http://smart.embl-heidelberg.de/smart/do_annotation.pl?DOMAIN={{{SMART}}} {{{SMART}}}]
| label9 = [[MEROPS]]
{{!}}-
| data9  = {{#if:{{{MEROPS|}}}| [https://www.ebi.ac.uk/merops/cgi-bin/famsum?family={{{MEROPS}}} {{{MEROPS}}}]}}
}}
| label10 =  [[Structural Classification of Proteins|SCOP]]
{{#if:{{{PROSITE|}}}|
| data10  = {{#if:{{{SCOP|}}}| [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?tlev=fa;&amp;pdb={{{SCOP}}} {{{SCOP}}}]}}
! style="background-color: #e7dcc3" {{!}} [[PROSITE]]  
| label11 =  [[SUPERFAMILY]]
{{!}} style="background-color: #eee" {{!}} [http://www.expasy.org/cgi-bin/prosite-search-ac?{{{PROSITE}}} {{{PROSITE}}}]
| data11  = {{#if:{{{SCOP|}}}| [http://supfam.org/SUPERFAMILY/cgi-bin/search.cgi?search_field={{{SCOP}}} {{{SCOP}}}]}}
{{!}}-
| label12 =  [[TCDB]]
}}
| data12  = {{#if:{{{TCDB|}}}| [http://www.tcdb.org/search/result.php?tc={{{TCDB}}} {{{TCDB}}}]}}
{{#if:{{{Prosite|}}}|
| label13 =  [[Orientations of Proteins in Membranes database|OPM superfamily]]
! style="background-color: #e7dcc3" {{!}} [[PROSITE]]
| data13  = {{#if:{{{OPM family|}}}|[https://opm.phar.umich.edu/superfamilies/{{{OPM family}}} {{{OPM family}}}]}}
{{!}} style="background-color: #eee" {{!}} [http://www.expasy.org/cgi-bin/prosite-search-ac?{{{Prosite}}} {{{Prosite}}}]
| label14 =  [[Orientations of Proteins in Membranes database|OPM protein]]
{{!}}-
| data14  = {{#if:{{{OPM protein|}}}| [https://opm.phar.umich.edu/proteins?search={{{OPM protein}}} {{{OPM protein}}}]}}
}}
| label15 =  [[CAZy]]
{{#if:{{{MEROPS|}}}|
| data15  = {{#if:{{{CAZy|}}}| [http://www.cazy.org/{{{CAZy}}}.html {{{CAZy}}}]}}
! style="background-color: #e7dcc3" {{!}} [[MEROPS]]  
| label16 =  [[Conserved Domain Database|CDD]]
{{!}} style="background-color: #eee" {{!}} [http://merops.sanger.ac.uk/cgi-bin/merops.cgi?id={{{MEROPS}}} {{{MEROPS}}}]
| data16  = {{#if:{{{CDD|}}}| [https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid={{{CDD}}} {{{CDD}}}]}}
{{!}}-
| label18 =  [[Membranome database|Membranome]]
}}
| data18  = {{#if:{{{Membranome superfamily|}}}|[http://membranome.org/protein_superfamilies/{{{Membranome superfamily}}} {{{Membranome superfamily}}}]}}
{{#if:{{{SCOP|}}}|
| label19 =  [[Membranome database|Membranome]]
! style="background-color: #e7dcc3" {{!}} [[Structural Classification of Proteins|SCOP]]  
| data19  = {{#if:{{{Membranome family|}}}|[http://membranome.org/protein_families/{{{Membranome family}}} {{{Membranome family}}}]}}
{{!}} style="background-color: #eee" {{!}} [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?tlev=fa;&amp;pdb={{{SCOP}}} {{{SCOP}}}]
 
{{!}}-
 
}}
| data20 = {{#if:{{{Pfam|}}}|{{infobox
{{#if:{{{TCDB|}}}|
  | bodyclass = collapsible collapsed
! style="background-color: #e7dcc3" {{!}} [[TCDB]]  
  | bodystyle = float:none; clear:none; margin:0; border-width:0; border-collapse:collapse; text-align:left; width:100%
{{!}} style="background-color: #eee" {{!}} [http://www.tcdb.org/search/result.php?tc={{{TCDB}}} {{{TCDB}}}]
  | headerstyle = background-color: #ddd
{{!}}-
  | labelstyle  = background-color: #e7dcc3; border:#fafafa 2px solid; border-width:3px 2px 0 0;
}}
  | datastyle  = background-color: #eee; border:#fafafa 2px solid; border-width:3px 0 0 2px;
{{#if:{{{OPM family|}}}|
 
! style="background-color: #e7dcc3" {{!}} [[Orientations of Proteins in Membranes database|OPM family]]  
  | header1 = Available protein structures:
{{!}} style="background-color: #eee" {{!}} [http://opm.phar.umich.edu/families.php?superfamily={{{OPM family}}} {{{OPM family}}}]
 
{{!}}-
  | label2 = [[Pfam]]
}}
  | data2  = [http://pfam.xfam.org/family/{{{Pfam}}}?tab=pdbBlock structures]
{{#if:{{{OPM protein|}}}|
  | label3 = [[Protein Data Bank|PDB]]
! style="background-color: #e7dcc3" {{!}} [[Orientations of Proteins in Membranes database|OPM protein]]
  | data3 = [http://www.rcsb.org/pdb/search/smartSubquery.do?smartSearchSubtype=PfamIdQuery&pfamID={{{Pfam}}} RCSB PDB]; [https://www.ebi.ac.uk/pdbe/entry/search/index?pfam_accession:{{{Pfam}}} PDBe]; [https://pdbj.org/searchFor?query={{{Pfam}}} PDBj]
{{!}} style="background-color: #eee" {{!}} [http://opm.phar.umich.edu/protein.php?search={{{OPM protein}}} {{{OPM protein}}}]
  | label4 = [[PDBsum]]
{{!}}-
  | data4 = [https://www.ebi.ac.uk/thornton-srv/databases/cgi-bin/pdbsum/GetPfamStr.pl?pfam_id={{{Pfam}}} structure summary]
}}
  }}}}
{{#if:{{{CAZy|}}}|
}}{{main other|{{#if:{{{image|}}}|<!--OK-->|[[Category:Protein pages needing a picture]]}}}}<noinclude>
! style="background-color: #e7dcc3" {{!}} [[CAZy]]  
{{documentation}}<!-- place category links on the /doc sub-page, not here -->
{{!}} style="background-color: #eee" {{!}} [http://www.cazy.org/{{{CAZy}}}.html {{{CAZy}}}]
</noinclude>
{{!}}-
}}
{{#if:{{{CDD|}}}|
! style="background-color: #e7dcc3" {{!}} [[Conserved domain database|CDD]]
{{!}} style="background-color: #eee" {{!}} [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid={{{CDD}}} {{{CDD}}}]
{{!}}-
}}
{{#if:{{{Pfam|}}}|
{{!}} colspan=2 cellpadding=0 {{!}}  
{{{!}} class="collapsible collapsed" style="text-align: left; border: none; width: 100%"
! colspan=2 style="text-align: center; background-color: #ddd" {{!}} Available protein structures:
{{!}}-
! style="background-color: #e7dcc3" {{!}} [[Pfam]]
{{!}} style="background-color: #eee" {{!}}  [http://pfam.sanger.ac.uk/family/{{{Pfam}}}#tabview=tab9 structures]
{{!}}-
! style="background-color: #e7dcc3" {{!}} [[Protein Data Bank|PDB]]
{{!}} style="background-color: #eee" {{!}} [http://www.rcsb.org/pdb/search/smartSubquery.do?smartSearchSubtype=PfamIdQuery&pfamID={{{Pfam}}} RCSB PDB]; [http://www.ebi.ac.uk/pdbe-srv/view/search?PFAM_domain={{{Pfam}}}&id_type=PFAM_domain&id_value={{{Pfam}}}&search_type=advanced PDBe]
{{!}}-
! style="background-color: #e7dcc3" {{!}} [[PDBsum]]
{{!}} style="background-color: #eee" {{!}} [http://www.ebi.ac.uk/thornton-srv/databases/cgi-bin/pdbsum/GetPfamStr.pl?pfam_id={{{Pfam}}} structure summary]
{{!}}}
}}
|}<noinclude>{{documentation}}<!-- place category and language links on the /doc sub-page, not here --></noinclude>
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